Amsterdam, The Netherlands (NL-Amsterdam)
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- Site forcing
- Quality control and gap filling procedure
- Bias correction diurnal comparison
Observations (before additional gap filling)
Site forcing metadata
| observation_attributes | |
|---|---|
| title | Continuous meterological forcing from NL-Amsterdam |
| summary | Flux tower observations from Amsterdam, The Netherlands after quality control, with gap filling from bias corrected ERA5 surface meteorological data. Developed for use in the Urban-PLUMBER model evaluation project. Attribute any use to “Harmonized, gap-filled dataset from 20 urban flux tower sites” |
| sitename | NL-Amsterdam |
| long_sitename | Amsterdam, The Netherlands |
| version | v1 |
| keywords | urban, flux tower, eddy covariance, observations |
| conventions | ALMA, CF, ACDD-1.3 |
| featureType | timeSeries |
| license | CC-BY-4.0: https://creativecommons.org/licenses/by/4.0/ |
| time_coverage_start | 2009-01-01 00:00:00 |
| time_coverage_end | 2020-10-13 10:00:00 |
| time_analysis_start | 2019-01-01 00:00:00 |
| time_shown_in | UTC |
| local_utc_offset_hours | 1.0 |
| timestep_interval_seconds | 1800.0 |
| timestep_number_spinup | 175296 |
| timestep_number_analysis | 31269 |
| project | Urban-PLUMBER multi-site model evaluation project for urban areas |
| references | Data from “Harmonized gap-filled dataset from 20 urban flux tower sites”: https://doi.org/10.5281/zenodo.5517550 |
| project_contact | Mathew Lipson (m.lipson@unsw.edu.au), Sue Grimmond (c.s.grimmond@reading.ac.uk), Martin Best (martin.best@metoffice.gov.uk) |
| observations_contact | Bert Heusinkveld (bert.heusinkveld@wur.nl) & Gert-Jan Steeneveld (gert-jan.steeneveld@wur.nl), Wageningen University |
| observations_reference | Horst et al. (in preparation) |
| date_created | 2022-09-22 16:01:35 |
| source | https://github.com/matlipson/urban-plumber_pipeline |
| other_references | ERA5: Copernicus Climate Change Service (C3S) (2017): https://cds.climate.copernicus.eu/cdsapp#!/home NCI Australia: http://doi.org/10.25914/5f48874388857 |
| acknowledgements | Contains modified Copernicus Climate Change Service Information 2021 (ERA5 hourly data on single levels). Data from replica hosted by NCI Australia. |
| comment | Rainfall, air pressure and humidity observations from Schiphol Airport, with pressure corrected to tower height. Sensible and latent heat periods flagged 0 included. Given specific humidity results in RH>100, so using given RH (limited to 100) converted to Qair. |
| history | v0.9 (2021-09-08): beta issue; v1 (2022-09-15): with publication in ESSD |
Site images
 Regional map. © OpenStreetMap |
 Site map with 500 m radius. © OpenStreetMap |
 Site photo. © B. Heusinkveld |
 Site aerial photo with 500 m radius. © OpenStreetMap, Microsoft |
Maps developed from: Hrisko, J. (2020). Geographic Visualizations in Python with Cartopy. Maker Portal.
Site characteristics
| id | parameter | value | units | source | doi |
|---|---|---|---|---|---|
| 1 | latitude | 52.3665 | degrees_north | ven der Horst (in prep.) | - |
| 2 | longitude | 4.8929 | degrees_east | ven der Horst (in prep.) | - |
| 3 | ground_height | 0 | m | ven der Horst (in prep.) | - |
| 4 | measurement_height_above_ground | 40 | m | ven der Horst (in prep.) | - |
| 5 | impervious_area_fraction | 0.68 | 1 | ven der Horst (in prep.) | - |
| 6 | tree_area_fraction | 0.15 | 1 | ven der Horst (in prep.) | - |
| 7 | grass_area_fraction | 0 | 1 | ven der Horst (in prep.) | - |
| 8 | bare_soil_area_fraction | 0 | 1 | ven der Horst (in prep.) | - |
| 9 | water_area_fraction | 0.17 | 1 | ven der Horst (in prep.) | - |
| 10 | roof_area_fraction | 0.44 | 1 | ven der Horst (in prep.) | - |
| 11 | road_area_fraction | 0.07 | 1 | ven der Horst (in prep.) | - |
| 12 | other_paved_area_fraction | 0.17 | 1 | ven der Horst (in prep.) | - |
| 13 | building_mean_height | 14.2 | m | ven der Horst (in prep.) | - |
| 14 | tree_mean_height | 12 | m | estimate | - |
| 15 | roughness_length_momentum | 0.7425 | m | ven der Horst (in prep.) (morphometric) | - |
| 16 | displacement_height | 10.035 | m | ven der Horst (in prep.) (morphometric) | - |
| 17 | canyon_height_width_ratio | 0.92 | 1 | estimated, see notes | derived from 0.326 frontal area index reported in Horst (2021) and Eq. 7 & 8 in Porson et al. 2010 |
| 18 | wall_to_plan_area_ratio | 1.02 | 1 | estimated, see notes | derived from 0.326 frontal area index reported in Horst (2021) and Eq. 1 in Masson et al. 2020 |
| 19 | average_albedo_at_midday | 0.096 | 1 | median of observations | - |
| 20 | resident_population_density | 14165 | person/km2 | Steeneveld, pers. comm. | mean of neighbouring districts from Dutch national statistics office |
| 21 | anthropogenic_heat_flux_mean | 43.4 | W/m2 | Varquez et al (2021) | https://doi.org/10.1038/s41597-021-00850-w |
| 22 | topsoil_clay_fraction | 0.19 | 1 | OpenLandMap | https://doi.org/10.5281/zenodo.2525663 |
| 23 | topsoil_sand_fraction | 0.6 | 1 | OpenLandMap | https://doi.org/10.5281/zenodo.2525662 |
| 24 | topsoil_bulk_density | 1380 | kg/m3 | OpenLandMap | https://doi.org/10.5281/zenodo.2525665 |
| 25 | building_height_standard_deviation | 11.21 | m | estimated, see notes | derived from morphology using eq. 2 of Kanda et al. (2013) |
| 26 | roughness_length_momentum_mac | 0.77 | m | Macdonald method | derived from morphology using eq. 26 of Macdonald et al. (1998) |
| 27 | displacement_height_mac | 10.07 | m | Macdonald method | derived from morphology using eq. 23 of Macdonald et al. (1998) |
| 28 | roughness_length_momentum_kanda | 2.22 | m | Kanda method | derived from morphology using eq. 12a of Kanda et al. (2013) |
| 29 | displacement_height_kanda | 25.17 | m | Kanda method | derived from morphology using eq. 10a of Kanda et al. (2013) |
Site forcing
SWdown forcing
LWdown forcing
Tair forcing
Qair forcing
PSurf forcing
Rainf forcing
Snowf forcing
Wind_N forcing
Wind_E forcing
Quality control (qc) and gap filling procedure
QC process on observations
- Out-of-range: removal of unphysical values (e.g. negative shortwave radiation) using the ALMA expected range protocol.
- Night: nocturnal shortwave radiation set to zero, excluding civil twilight (when the sun is 6° below the horizon).
- Constant: four or more timesteps with the same value (excluding zero values for shortwave radiation, rainfall and snowfall) are removed as suspicious.
- Outlier: remove values outside ±4 standard deviations for each hour in a rolling 30-day window (to account for diurnal and seasonal variations). Repeat with a larger tolerance (± 5 standard deviations) until no outliers remain. The outlier test is not applied to precipitation.
- Visual: remaining suspect readings are removed manually via visual inspection.
Gap-filling process
- contemporaneous and nearby flux tower or weather observing sites (where available and provided by observing groups)
- small gaps (≤ 2 hours) are linearly interpolated from the adjoining observations
- larger gaps (and a 10-year spin-up period) are filled with bias corrected ERA5 data (see below)
- snowfall from ERA5, with water equivalent removed from rainfall to retain mass balance
LWdown diurnal qc
LWup diurnal qc
PSurf diurnal qc
Qair diurnal qc
Qh diurnal qc
Qle diurnal qc
Qtau diurnal qc
Rainf diurnal qc
SWdown diurnal qc
SWup diurnal qc
Snowf diurnal qc
Tair diurnal qc
Wind_E diurnal qc
Wind_N diurnal qc
Bias correction diurnal comparison
Four methods drawing on ERA5 reanalysis are compared relative to the quality-controlled flux tower data. The methods are:
- ERA5: the nearest land based 0.25° resolution ERA5 grid (i.e. without bias correction)
- WFDE5: the nearest WFDE5 grid (which use 0.5° gridded monthly observations for bias correction)
- UP: the Urban-PLUMBER methods used in this collection (using site observations for bias correction)
- LN: linear methods based on FLUXNET2015 (using site observations for bias correction)
ERA5 bias correction
The UP methods are as follows:
- for downwelling longwave, temperature, humidity and pressure: calculate the mean bias between ERA5 and flux tower data in a 30-day rolling window for every hour and each day of the year, apply that bias correction to all ERA5 data. For periods not covered by observations, linearly interpolate between known biases for each hour separately.
- for precipitation: calculate total precipitation in a 10-year period and calculate the ratio between ERA5 data and the nearest GHCN-D station and apply that correction factor to ERA5 data.
- for wind: apply wind log profile correction from ERA5 10m wind to tower measurement height using site roughness and displacement, with original grid roughness iteratively revised so that mean corrected wind speed matches observation.
- for downwelling shortwave: use ERA5 data without correction
Mean absolute error (MAE) is shown in the legend.
Tair diurnal bias correction
Qair diurnal bias correction
PSurf diurnal bias correction
LWdown diurnal bias correction
SWdown diurnal bias correction
Wind diurnal bias correction
Rainf diurnal bias correction
